PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_01225-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 346aa    MW: 37669.7 Da    PI: 7.1779
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_01225-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.51e-07140210355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCC.C....................TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPk.as.................kapskKlsKaeiLekAveYIksLq 55 
                      + h ++Er+RR+++ + f  L +++P                     + ++   +K + L  +++Y+k+L+
  TRIUR3_01225-P1 140 QEHVIAERKRREKLQQQFVSLATIIPGiKKvrlcehqvpagcslnvsHCHCIQTDKLSLLGSTIDYVKQLE 210
                      5799***********************7779***************5555555****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.941137209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-5140210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-12140214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-11141228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.37E-5142214No hitNo description
SMARTSM003531.1E-6143215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
QWLMSCQQEE ELVYIYQQEG GPVPLPLPGM EQQFAEPPSL ADHQERYYTP PLPIPSSNPS  60
RSSNFPSFGA SSPLPNLPFG PAPVENELGQ LSQPPSSNFL SFGSALNFSE GACWRHNGAQ  120
GTMQQLQVPQ RRGRAPANAQ EHVIAERKRR EKLQQQFVSL ATIIPGIKKV RLCEHQVPAG  180
CSLNVSHCHC IQTDKLSLLG STIDYVKQLE EKVKALDEQG SRRSSESMVF HSKCRISAAD  240
NGAAGPSGSG SGHSSPDIEA SILGNTALLS IWCRGRKGVL VMALSELENQ GLSIISTNIV  300
PFTNSYLNIT ITAKAMAPLP SYIIEEGFSS TVELVKNLKM ALRSFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145150ERKRRE
2146151RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010230206.11e-118PREDICTED: transcription factor bHLH18-like isoform X1
TrEMBLT1L9S30.0T1L9S3_TRIUA; Uncharacterized protein
STRINGBRADI1G69110.11e-120(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-26bHLH family protein